Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-xylose utilization transcriptional activator xylr | FFG67_RS15170 | Not Available | Positive | 3130664 - 3131842 | 44871.7 |
| protein bax | FFG67_RS15175 | Not Available | Negative | 3131950 - 3132774 | 30869.3 |
| alpha-amylase | FFG67_RS15180 | Not Available | Positive | 3133094 - 3135124 | 75761.6 |
| valine--pyruvate transaminase | FFG67_RS15185 | Not Available | Positive | 3135302 - 3136555 | 46689.9 |
| 4fe-4s binding protein | FFG67_RS15190 | Not Available | Negative | 3136706 - 3137179 | 17434.2 |
| iclr family transcriptional regulator yiaj | FFG67_RS15195 | Not Available | Negative | 3137281 - 3138129 | 31110.5 |
| 3-dehydro-l-gulonate 2-dehydrogenase | FFG67_RS15200 | Not Available | Positive | 3138330 - 3139328 | 36588.9 |
| yhch/yjgk/yial family protein | FFG67_RS15205 | Not Available | Positive | 3139340 - 3139807 | 17519.0 |
| 2,3-diketo-l-gulonate trap transporter small permease yiam | FFG67_RS15210 | Not Available | Positive | 3139925 - 3140398 | 17516.9 |
| 2,3-diketo-l-gulonate trap transporter large permease yian | FFG67_RS15215 | Not Available | Positive | 3140401 - 3141678 | 45371.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





