Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein yhjd | FFG67_RS14870 | Not Available | Positive | 3062131 - 3063144 | 37902.6 |
| mfs transporter | FFG67_RS14875 | Not Available | Positive | 3063555 - 3064877 | 47180.9 |
| asma family protein | FFG67_RS14880 | Not Available | Negative | 3065111 - 3067171 | 74461.8 |
| cyclic-guanylate-specific phosphodiesterase | FFG67_RS14885 | Not Available | Negative | 3067241 - 3068008 | 29602.9 |
| 2-dehydro-3-deoxygluconokinase | FFG67_RS14890 | Not Available | Positive | 3068240 - 3069169 | 33963.2 |
| m16 family metallopeptidase | FFG67_RS14895 | Not Available | Negative | 3069265 - 3070761 | 55472.4 |
| c4-dicarboxylate transporter dctc | FFG67_RS14900 | Not Available | Negative | 3070982 - 3072268 | 45439.2 |
| biofilm formation regulator hmsp | FFG67_RS14905 | Not Available | Negative | 3072451 - 3074439 | 74484.0 |
| cellulose synthase complex outer membrane protein bcsc | FFG67_RS14910 | Not Available | Negative | 3074521 - 3077994 | 127743.0 |
| cellulose synthase complex periplasmic endoglucanase bcsz | FFG67_RS14915 | Not Available | Negative | 3077976 - 3079082 | 41762.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





