Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FFG67_RS14820 | Not Available | Negative | 3047662 - 3047940 | 9789.79 |
| multidrug transporter subunit mdte | FFG67_RS14825 | Not Available | Positive | 3048048 - 3049157 | 39309.4 |
| multidrug efflux pump rnd permease mdtf | FFG67_RS14830 | Not Available | Positive | 3049182 - 3052295 | 111502.0 |
| acid resistance transcriptional activator gadw | FFG67_RS14835 | Not Available | Negative | 3052658 - 3053386 | 28025.0 |
| acid resistance transcriptional activator gadx | FFG67_RS14840 | Not Available | Negative | 3053754 - 3054578 | 31455.3 |
| glutamate decarboxylase | FFG67_RS14845 | Not Available | Negative | 3054948 - 3056348 | 52688.0 |
| cytochrome c peroxidase | FFG67_RS14850 | Not Available | Negative | 3056559 - 3057956 | 51471.2 |
| alpha,alpha-trehalase | FFG67_RS14855 | Not Available | Positive | 3058361 - 3060010 | 63718.1 |
| helix-turn-helix transcriptional regulator | FFG67_RS14860 | Not Available | Negative | 3060061 - 3060663 | 22635.6 |
| lysr family transcriptional regulator | FFG67_RS14865 | Not Available | Positive | 3061183 - 3062082 | 33275.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





