Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr/smtb family transcription factor | FFG67_RS14770 | Not Available | Negative | 3039274 - 3039570 | 10842.5 |
| permease | FFG67_RS14775 | Not Available | Positive | 3039678 - 3040679 | 35181.7 |
| hypothetical protein | FFG67_RS14780 | Not Available | Positive | 3041260 - 3042375 | 42408.8 |
| outer membrane lipoprotein slp | FFG67_RS14785 | Not Available | Positive | 3042729 - 3043295 | 20949.1 |
| helix-turn-helix transcriptional regulator | FFG67_RS14790 | Not Available | Positive | 3043451 - 3043981 | 20409.5 |
| mgtc/sapb family protein | FFG67_RS14795 | Not Available | Negative | 3044023 - 3044670 | 23228.9 |
| acid-activated periplasmic chaperone hdeb | FFG67_RS14800 | Not Available | Negative | 3044734 - 3045060 | 12043.5 |
| acid-activated periplasmic chaperone hdea | FFG67_RS14805 | Not Available | Negative | 3045176 - 3045508 | 11858.2 |
| acid-resistance protein hded | FFG67_RS14810 | Not Available | Positive | 3045763 - 3046335 | 20904.6 |
| acid resistance transcriptional activator gade | FFG67_RS14815 | Not Available | Positive | 3047134 - 3047661 | 20600.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





