Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1488 domain-containing protein | FFG67_RS13665 | Not Available | Negative | 2828109 - 2828366 | 10007.5 |
| shikimate dehydrogenase | FFG67_RS13670 | Not Available | Negative | 2828363 - 2829181 | 29465.4 |
| l-threonylcarbamoyladenylate synthase type 1 tsac | FFG67_RS13675 | Not Available | Negative | 2829186 - 2829758 | 20641.7 |
| type i dna topoisomerase | FFG67_RS13680 | Not Available | Negative | 2829763 - 2830305 | 19862.0 |
| duf494 family protein smg | FFG67_RS13685 | Not Available | Negative | 2830334 - 2830807 | 18484.2 |
| hypothetical protein | FFG67_RS13690 | Not Available | Negative | 2830779 - 2831898 | 40210.4 |
| peptide deformylase | FFG67_RS13695 | Not Available | Positive | 2832028 - 2832537 | 19329.6 |
| methionyl-trna formyltransferase | FFG67_RS13700 | Not Available | Positive | 2832552 - 2833499 | 34170.4 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | FFG67_RS13705 | Not Available | Positive | 2833545 - 2834834 | 48322.2 |
| trk system potassium transporter trka | FFG67_RS13710 | Not Available | Positive | 2834856 - 2836232 | 50370.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





