Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxy-3-oxopropionate reductase | FFG67_RS12915 | Not Available | Negative | 2675231 - 2676121 | 30661.6 |
| 2-dehydro-3-deoxyglucarate aldolase | FFG67_RS12920 | Not Available | Negative | 2676151 - 2676921 | 27400.6 |
| galactarate/glucarate/glycerate transporter garp | FFG67_RS12925 | Not Available | Negative | 2676937 - 2678271 | 49012.0 |
| galactarate dehydratase | FFG67_RS12930 | Not Available | Positive | 2678646 - 2680217 | 56344.9 |
| type ii toxin-antitoxin system antitoxin prlf | FFG67_RS12935 | Not Available | Positive | 2680366 - 2680701 | 12359.7 |
| type ii toxin-antitoxin system ribonuclease toxin yhav | FFG67_RS12940 | Not Available | Positive | 2680701 - 2681165 | 17808.1 |
| aga operon transcriptional regulator agar | FFG67_RS12945 | Not Available | Negative | 2681220 - 2682029 | 29574.3 |
| tagatose-bisphosphate aldolase subunit kbaz | FFG67_RS12950 | Not Available | Positive | 2682278 - 2683558 | 47221.0 |
| pts n-acetylgalactosamine transporter subunit iib | FFG67_RS12955 | Not Available | Positive | 2683581 - 2684054 | 17056.8 |
| pts n-acetylgalactosamine transporter subunit iic | FFG67_RS12960 | Not Available | Positive | 2684065 - 2684844 | 27350.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





