Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family protein | FFG67_RS12715 | Not Available | Positive | 2635316 - 2636302 | 36248.3 |
| terc family membrane protein alx | FFG67_RS12720 | Not Available | Positive | 2636585 - 2637550 | 35983.1 |
| serine/threonine transporter sstt | FFG67_RS12725 | Not Available | Positive | 2638166 - 2639410 | 43480.4 |
| ygjv family protein | FFG67_RS12730 | Not Available | Negative | 2639415 - 2639966 | 20576.8 |
| altronate dehydratase | FFG67_RS12735 | Not Available | Negative | 2640049 - 2641536 | 54126.2 |
| glucuronate isomerase | FFG67_RS12740 | Not Available | Negative | 2641551 - 2642963 | 53968.1 |
| hexuronate transporter exut | FFG67_RS12745 | Not Available | Positive | 2643446 - 2644744 | 46909.1 |
| cfae/cbld family pilus tip adhesin | FFG67_RS12750 | Not Available | Negative | 2644832 - 2645920 | 40457.0 |
| tcfc e-set like domain-containing protein | FFG67_RS12755 | Not Available | Negative | 2645917 - 2648601 | 98413.7 |
| cs1 type fimbrial major subunit | FFG67_RS12760 | Not Available | Negative | 2648693 - 2649193 | 17741.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





