Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpod | FFG67_RS12615 | Not Available | Positive | 2611497 - 2613338 | 70211.2 |
| g/u mismatch-specific dna glycosylase | FFG67_RS12620 | Not Available | Negative | 2613416 - 2613922 | 18674.5 |
| Trna-met | Not Available | Not Available | Positive | 2614047 - 2614122 | Not Available |
| nadph-dependent ferric chelate reductase nfef | FFG67_RS12630 | Not Available | Negative | 2614176 - 2614940 | 28859.1 |
| dna-binding transcriptional regulator nfer | FFG67_RS12635 | Not Available | Positive | 2615217 - 2615840 | 23402.7 |
| aerotaxis sensor receptor aer | FFG67_RS12640 | Not Available | Negative | 2615994 - 2617514 | 55134.1 |
| putrescine aminotransferase | FFG67_RS12645 | Not Available | Positive | 2617932 - 2619311 | 49634.2 |
| pp_02492 | FFG67_RS12650 | Not Available | Negative | 2619353 - 2619685 | Not Available |
| transcriptional regulator ebgr | FFG67_RS12655 | Not Available | Positive | 2619904 - 2620887 | 36239.5 |
| beta-galactosidase subunit alpha | FFG67_RS12660 | Not Available | Positive | 2621071 - 2624163 | 117818.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





