Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system major pseudopilin gspg | FFG67_RS12060 | Not Available | Negative | 2492148 - 2492603 | 16663.8 |
| type ii secretion system inner membrane protein gspf | FFG67_RS12065 | Not Available | Negative | 2492620 - 2493843 | 44956.7 |
| type ii secretion system atpase gspe | FFG67_RS12070 | Not Available | Negative | 2493843 - 2495336 | 55207.8 |
| type ii secretion system secretin gspd | FFG67_RS12075 | Not Available | Negative | 2495336 - 2497396 | 74206.1 |
| type ii secretion system protein gspc | FFG67_RS12080 | Not Available | Negative | 2497426 - 2498385 | 35725.2 |
| hypothetical protein | FFG67_RS12085 | Not Available | Negative | 2498403 - 2498812 | 14403.0 |
| prepilin peptidase pppa | FFG67_RS12090 | Not Available | Negative | 2498878 - 2499687 | 29525.9 |
| lipoprotein metalloprotease ssle | FFG67_RS12095 | Not Available | Negative | 2499827 - 2504392 | 167332.0 |
| glycolate permease glca | FFG67_RS12100 | Not Available | Negative | 2504878 - 2506560 | 58909.6 |
| malate synthase g | FFG67_RS12105 | Not Available | Negative | 2506916 - 2509087 | 80543.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





