Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine decarboxylase | FFG67_RS12010 | Not Available | Negative | 2484354 - 2486489 | 79543.6 |
| protein yqgh | FFG67_RS12015 | Not Available | Negative | 2486651 - 2486734 | 3188.1 |
| duf554 domain-containing protein | FFG67_RS12020 | Not Available | Positive | 2486887 - 2487594 | 24615.5 |
| Trna-phe | Not Available | Not Available | Positive | 2487700 - 2487775 | Not Available |
| gspm family type ii secretion system protein yghd | FFG67_RS12030 | Not Available | Negative | 2487924 - 2488460 | 20287.5 |
| type ii secretion system protein gspl | FFG67_RS12035 | Not Available | Negative | 2488462 - 2489640 | 44230.4 |
| type ii secretion system minor pseudopilin gspk | FFG67_RS12040 | Not Available | Negative | 2489637 - 2490614 | 36618.4 |
| type ii secretion system minor pseudopilin gspj | FFG67_RS12045 | Not Available | Negative | 2490617 - 2491216 | 22193.2 |
| type ii secretion system minor pseudopilin gspi | FFG67_RS12050 | Not Available | Negative | 2491213 - 2491584 | 13573.3 |
| type ii secretion system minor pseudopilin gsph | FFG67_RS12055 | Not Available | Negative | 2491581 - 2492144 | 21165.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





