Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-dehydro-3-deoxy-d-gluconate 5-dehydrogenase kdud | FFG67_RS11260 | Not Available | Negative | 2338846 - 2339607 | 27070.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | FFG67_RS11265 | Not Available | Negative | 2339637 - 2340473 | 31093.1 |
| acetyl-coa c-acetyltransferase | FFG67_RS11270 | Not Available | Negative | 2340760 - 2341941 | 41007.2 |
| amino acid permease | FFG67_RS11275 | Not Available | Positive | 2342196 - 2343425 | 45101.9 |
| helix-turn-helix transcriptional regulator | FFG67_RS11280 | Not Available | Positive | 2343885 - 2344517 | 24401.4 |
| transcriptional regulator | FFG67_RS11285 | Not Available | Positive | 2344850 - 2345659 | 30846.9 |
| protein yqej | FFG67_RS11290 | Not Available | Positive | 2345652 - 2346134 | 18732.6 |
| hypothetical protein | FFG67_RS11295 | Not Available | Negative | 2346167 - 2346247 | 3203.84 |
| hypothetical protein | FFG67_RS11300 | Not Available | Negative | 2346283 - 2346707 | 16001.4 |
| hypothetical protein | FFG67_RS11305 | Not Available | Positive | 2346901 - 2347391 | 18534.6 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





