Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit hycg | FFG67_RS10615 | Not Available | Negative | 2196653 - 2197420 | 27999.7 |
| formate hydrogenlyase subunit hycf | FFG67_RS10620 | Not Available | Negative | 2197420 - 2197962 | 20330.4 |
| formate hydrogenlyase subunit hyce | FFG67_RS10625 | Not Available | Negative | 2197972 - 2199681 | 64956.1 |
| formate hydrogenlyase subunit hycd | FFG67_RS10630 | Not Available | Negative | 2199699 - 2200622 | 33031.4 |
| formate hydrogenlyase subunit 3 | FFG67_RS10635 | Not Available | Negative | 2200625 - 2202451 | 64187.3 |
| formate hydrogenlyase subunit hycb | FFG67_RS10640 | Not Available | Negative | 2202448 - 2203059 | 21874.4 |
| formate hydrogenlyase regulator hyca | FFG67_RS10645 | Not Available | Negative | 2203184 - 2203645 | 17627.9 |
| hydrogenase maturation nickel metallochaperone hypa | FFG67_RS10650 | Not Available | Positive | 2203857 - 2204207 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | FFG67_RS10655 | Not Available | Positive | 2204211 - 2205083 | 31566.8 |
| hydrogenase 3 maturation protein hypc | FFG67_RS10660 | Not Available | Positive | 2205074 - 2205346 | 9732.58 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





