Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | FFG67_RS09395 | Not Available | Positive | 1942064 - 1944067 | 73045.8 |
| duf1176 domain-containing protein | FFG67_RS09400 | Not Available | Negative | 1944163 - 1945206 | 38733.5 |
| gdp-mannose pyrophosphatase nudk | FFG67_RS09405 | Not Available | Negative | 1945332 - 1945907 | 21719.9 |
| formate-dependent uric acid utilization protein aega | FFG67_RS09410 | Not Available | Negative | 1945975 - 1947954 | 71848.0 |
| nitrate/nitrite two-component system sensor histidine kinase narq | FFG67_RS09415 | Not Available | Positive | 1948160 - 1949860 | 63630.6 |
| multidrug efflux rnd transporter permease acrd | FFG67_RS09420 | Not Available | Positive | 1950024 - 1953137 | 113083.0 |
| protein ypfm | FFG67_RS09425 | Not Available | Negative | 1953236 - 1953295 | 2408.02 |
| arsc family reductase | FFG67_RS09430 | Not Available | Positive | 1953676 - 1954032 | 13515.2 |
| succinyl-diaminopimelate desuccinylase | FFG67_RS09435 | Not Available | Positive | 1954036 - 1955163 | 41287.4 |
| ypfn family protein | FFG67_RS09440 | Not Available | Positive | 1955191 - 1955391 | 8071.78 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





