Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yfdy family protein | FFG67_RS08995 | Not Available | Negative | 1867005 - 1867247 | 8923.5 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | FFG67_RS09000 | Not Available | Positive | 1867600 - 1868520 | 35495.5 |
| membrane protein ypdk | FFG67_RS09005 | Not Available | Positive | 1868876 - 1868947 | 2704.57 |
| alanine transaminase | FFG67_RS09010 | Not Available | Negative | 1869012 - 1870250 | 46218.8 |
| two-component system sensor histidine kinase ypda | FFG67_RS09015 | Not Available | Positive | 1870627 - 1872324 | 62661.3 |
| two-component system response regulator ypdb | FFG67_RS09020 | Not Available | Positive | 1872339 - 1873073 | 28722.6 |
| arac family transcriptional regulator | FFG67_RS09025 | Not Available | Positive | 1873086 - 1873943 | 32416.5 |
| phosphoenolpyruvate--protein phosphotransferase | FFG67_RS09030 | Not Available | Negative | 1873946 - 1876441 | 92253.4 |
| aminopeptidase | FFG67_RS09035 | Not Available | Negative | 1876466 - 1877503 | 37426.1 |
| aminopeptidase | FFG67_RS09040 | Not Available | Negative | 1877503 - 1878588 | 39604.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





