Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-lactate dehydrogenase | FFG67_RS07475 | Not Available | Positive | 1507360 - 1509075 | 64680.0 |
| d-alanyl-d-alanine endopeptidase | FFG67_RS07480 | Not Available | Negative | 1509113 - 1510045 | 33855.3 |
| yip1 family protein | FFG67_RS07485 | Not Available | Negative | 1510219 - 1510806 | 21692.0 |
| deda family protein | FFG67_RS07490 | Not Available | Positive | 1510976 - 1511554 | 21479.9 |
| sdr family oxidoreductase | FFG67_RS07495 | Not Available | Negative | 1511684 - 1512445 | 26983.4 |
| multidrug resistance outer membrane protein mdtq | FFG67_RS07500 | Not Available | Negative | 1512498 - 1513934 | 52254.0 |
| small membrane protein yohp | FFG67_RS07505 | Not Available | Positive | 1514158 - 1514241 | 3092.28 |
| trna dihydrouridine(16) synthase dusc | FFG67_RS07510 | Not Available | Negative | 1514629 - 1515579 | 35267.6 |
| cida/lrga family protein | FFG67_RS07515 | Not Available | Positive | 1515818 - 1516216 | 14579.6 |
| cidb/lrgb family autolysis modulator | FFG67_RS07520 | Not Available | Positive | 1516213 - 1516908 | 24471.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





