Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine-type d-ala-d-ala carboxypeptidase dacd | FFG67_RS06825 | Not Available | Negative | 1357322 - 1358488 | 43304.5 |
| exodeoxyribonuclease i | FFG67_RS06830 | Not Available | Positive | 1358697 - 1360124 | 54477.6 |
| thiosulfate utilization sulfurtransferase tsub/yeed | FFG67_RS06835 | Not Available | Negative | 1360167 - 1360394 | 8092.61 |
| thiosulfate utilization transporter tsua/yeee | FFG67_RS06840 | Not Available | Negative | 1360408 - 1361466 | 38042.6 |
| putrescine/proton symporter plap | FFG67_RS06845 | Not Available | Negative | 1361645 - 1363003 | 49540.5 |
| membrane protein yoei | FFG67_RS06850 | Not Available | Negative | 1362993 - 1363055 | 2241.66 |
| lysr substrate-binding domain-containing protein | FFG67_RS06855 | Not Available | Negative | 1363270 - 1364199 | 34171.0 |
| sdr family oxidoreductase | FFG67_RS06860 | Not Available | Negative | 1364245 - 1365069 | 29723.8 |
| type ii toxin-antitoxin system mrna interferase toxin yoeb | FFG67_RS06865 | Not Available | Negative | 1365152 - 1365406 | 10216.1 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | FFG67_RS06870 | Not Available | Negative | 1365403 - 1365654 | 9308.13 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





