Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain KS-NP019 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain KS-NP019 chromosome, complete genome.
Gene Summary
Adenine Count
1275315 bp
Thymine Count
1270163 bp
Guanine Count
1315610 bp
Cytosine Count
1317672 bp
Genome Length
5178760 bp
Protein-coding Genes
4450 genes
Non-Coding Genes
635 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron/manganese abc transporter permease subunit sitc | FFG67_RS03775 | Not Available | Positive | 796173 - 797030 | 30862.7 |
| iron/manganese abc transporter permease subunit sitd | FFG67_RS03780 | Not Available | Positive | 797027 - 797884 | 30622.8 |
| starvation-sensing protein rspa | FFG67_RS04080 | Not Available | Negative | 846535 - 847749 | 45971.0 |
| ynfa family protein | FFG67_RS04085 | Not Available | Negative | 847955 - 848281 | 11920.2 |
| duf1283 family protein | FFG67_RS04090 | Not Available | Positive | 848416 - 848757 | 12909.3 |
| spermidine n1-acetyltransferase | FFG67_RS04095 | Not Available | Positive | 848792 - 849352 | 21888.2 |
| ynfc family lipoprotein | FFG67_RS04100 | Not Available | Negative | 849355 - 850065 | 26508.3 |
| duf1161 domain-containing protein | FFG67_RS04105 | Not Available | Positive | 850173 - 850478 | 10519.3 |
| selenate/tellurate reductase subunit ynfe | FFG67_RS04110 | Not Available | Positive | 850677 - 853103 | 89620.7 |
| selenate/tellurate reductase subunit ynff | FFG67_RS04115 | Not Available | Positive | 853164 - 855587 | 90019.1 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





