Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E2863 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain E2863 chromosome, complete genome.
Gene Summary
Adenine Count
1321996 bp
Thymine Count
1322986 bp
Guanine Count
1355524 bp
Cytosine Count
1356936 bp
Genome Length
5357442 bp
Protein-coding Genes
4560 genes
Non-Coding Genes
890 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee effector espf | EL381_RS18975 | Not Available | Negative | 3674874 - 3675524 | 22352.5 |
| type iii secretion system lee needle protein cochaperone escg | EL381_RS18980 | Not Available | Negative | 3675720 - 3675998 | 10265.4 |
| type iii secretion system lee needle filament protein escf | EL381_RS18985 | Not Available | Negative | 3676004 - 3676225 | 8127.69 |
| lcrr family type iii secretion system chaperone cesd2 | EL381_RS18990 | Not Available | Negative | 3676260 - 3676667 | 15786.8 |
| type iii secretion system lee translocon pore-forming subunit espb | EL381_RS18995 | Not Available | Negative | 3676674 - 3677636 | 32899.2 |
| type iii secretion system translocon subunit scte | EL381_RS19000 | Not Available | Negative | 3677657 - 3678799 | 39141.4 |
| type iii secretion system lee translocon filament protein espa | EL381_RS19005 | Not Available | Negative | 3678812 - 3679390 | 20507.2 |
| type iii secretion system lee gatekeeper sepl | EL381_RS19010 | Not Available | Negative | 3679449 - 3680504 | 39921.8 |
| type iii secretion system lee inner membrane ring protein escd | EL381_RS19015 | Not Available | Positive | 3680647 - 3681867 | 45235.7 |
| intimin type gamma | EL381_RS19020 | Not Available | Negative | 3682156 - 3684963 | 101470.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





