Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain E2863 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Genome Summary
Escherichia coli strain E2863 chromosome, complete genome.
Gene Summary
Adenine Count
1321996 bp
Thymine Count
1322986 bp
Guanine Count
1355524 bp
Cytosine Count
1356936 bp
Genome Length
5357442 bp
Protein-coding Genes
4560 genes
Non-Coding Genes
890 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin ldr family protein | EL381_RS07345 | Not Available | Negative | 1469874 - 1469981 | 3973.97 |
| type i toxin-antitoxin system toxin ldr family protein | EL381_RS07350 | Not Available | Negative | 1470410 - 1470517 | 4014.03 |
| sodium-potassium/proton antiporter chaa | EL381_RS07355 | Not Available | Negative | 1470922 - 1472022 | 39166.9 |
| putative cation transport regulator chab | EL381_RS07360 | Not Available | Positive | 1472292 - 1472522 | 8931.15 |
| glutathione-specific gamma-glutamylcyclotransferase | EL381_RS07365 | Not Available | Positive | 1472680 - 1473375 | 25476.7 |
| dsre/f sulfur relay family protein ychn | EL381_RS07370 | Not Available | Negative | 1473419 - 1473772 | 12693.5 |
| inverse autotransporter invasin ycho | EL381_RS07375 | Not Available | Positive | 1473957 - 1475351 | 52089.6 |
| two-component system response regulator narl | EL381_RS30420 | Not Available | Negative | 1475352 - 1476002 | 23928.3 |
| helix-turn-helix transcriptional regulator | EL381_RS07380 | Not Available | Negative | 1475995 - 1477790 | 67158.2 |
| nitrate transporter nark | EL381_RS07385 | Not Available | Positive | 1478129 - 1479520 | 49696.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





