Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS21720 | Not Available | Negative | 68209 - 68577 | 12876.7 |
| mfs transporter | SAMIE_RS21725 | Not Available | Negative | 68636 - 69973 | 46474.2 |
| metal-sensing transcriptional repressor | SAMIE_RS21730 | Not Available | Positive | 70065 - 70334 | 9718.68 |
| chromate resistance protein chrb domain-containing protein | SAMIE_RS21735 | Not Available | Positive | 70471 - 71322 | 30747.9 |
| chromate efflux transporter | SAMIE_RS21740 | Not Available | Positive | 71319 - 72734 | 49771.5 |
| superoxide dismutase | SAMIE_RS21745 | Not Available | Positive | 72766 - 73491 | 25527.3 |
| hypothetical protein | SAMIE_RS21750 | Not Available | Positive | 73823 - 74026 | 7304.68 |
| conjugal transfer protein trag n-terminal domain-containing protein | SAMIE_RS21755 | Not Available | Negative | 74035 - 76848 | 99509.8 |
| conjugal transfer protein trah | SAMIE_RS21760 | Not Available | Negative | 76867 - 78321 | 51792.7 |
| conjugal transfer protein traf | SAMIE_RS21765 | Not Available | Negative | 78321 - 79148 | 30769.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

