Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21 family transposase | SAMIE_RS21670 | Not Available | Negative | 53722 - 55236 | 57437.9 |
| hypothetical protein | SAMIE_RS21675 | Not Available | Negative | 55317 - 55517 | 7157.95 |
| error-prone dna polymerase | SAMIE_RS21680 | Not Available | Negative | 55860 - 59129 | 121861.0 |
| duf6504 family protein | SAMIE_RS21685 | Not Available | Negative | 59126 - 60682 | 56696.4 |
| imua family protein | SAMIE_RS21690 | Not Available | Negative | 60603 - 61334 | 26026.3 |
| hypothetical protein | SAMIE_RS21695 | Not Available | Positive | 61623 - 62042 | 15775.8 |
| hypothetical protein | SAMIE_RS21700 | Not Available | Negative | 62028 - 62246 | 7321.66 |
| efflux rnd transporter permease subunit | SAMIE_RS21705 | Not Available | Negative | 62508 - 65744 | 115625.0 |
| efflux rnd transporter periplasmic adaptor subunit | SAMIE_RS21710 | Not Available | Negative | 65741 - 66889 | 38428.5 |
| tolc family protein | SAMIE_RS21715 | Not Available | Negative | 66886 - 68154 | 44259.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

