Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sos response-associated peptidase family protein | SAMIE_RS21620 | Not Available | Negative | 44132 - 44653 | 19937.9 |
| sos response-associated peptidase | SAMIE_RS21625 | Not Available | Positive | 44711 - 45328 | 23129.6 |
| hypothetical protein | SAMIE_RS21630 | Not Available | Negative | 45333 - 46109 | 29850.5 |
| hypothetical protein | SAMIE_RS21635 | Not Available | Negative | 46162 - 47190 | 37849.2 |
| hypothetical protein | SAMIE_RS21640 | Not Available | Positive | 47204 - 47740 | 19734.3 |
| hepn domain-containing protein | SAMIE_RS21645 | Not Available | Positive | 47737 - 49140 | 51603.2 |
| gnat family n-acetyltransferase | SAMIE_RS21650 | Not Available | Positive | 49220 - 49717 | 17481.6 |
| duf4238 domain-containing protein | SAMIE_RS21655 | Not Available | Negative | 49796 - 50893 | 40725.5 |
| hypothetical protein | SAMIE_RS21660 | Not Available | Negative | 50911 - 52827 | 71820.4 |
| is21-like element helper atpase istb | SAMIE_RS21665 | Not Available | Negative | 53007 - 53735 | 26672.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

