Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tn3 family transposase | SAMIE_RS22735 | Not Available | Positive | 49775 - 52666 | 107888.0 |
| type ii toxin-antitoxin system rele/pare family toxin | SAMIE_RS22745 | Not Available | Positive | 53041 - 53391 | 13058.7 |
| helix-turn-helix domain-containing protein | SAMIE_RS22750 | Not Available | Positive | 53388 - 53726 | 12360.9 |
| para family partition atpase | SAMIE_RS22755 | Not Available | Positive | 54060 - 54743 | 23943.7 |
| ribbon-helix-helix domain-containing protein | SAMIE_RS22760 | Not Available | Positive | 54740 - 55006 | 9416.28 |
| ribbon-helix-helix domain-containing protein | SAMIE_RS22765 | Not Available | Positive | 55120 - 55311 | 7093.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

