Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is6 family transposase | SAMIE_RS22575 | Not Available | Negative | 22058 - 22825 | 29387.5 |
| mfs transporter | SAMIE_RS22580 | Not Available | Positive | 22894 - 23931 | 35859.8 |
| is21-like element helper atpase istb | SAMIE_RS22585 | Not Available | Negative | 24041 - 24904 | 32241.9 |
| is21 family transposase | SAMIE_RS22590 | Not Available | Negative | 24901 - 26373 | 55523.8 |
| iclr family transcriptional regulator c-terminal domain-containing protein | SAMIE_RS22595 | Not Available | Negative | 27023 - 27793 | 27436.3 |
| 3-oxoadipyl-coa thiolase | SAMIE_RS22600 | Not Available | Negative | 27862 - 29064 | 41360.8 |
| 3-oxoacid coa-transferase subunit b | SAMIE_RS22605 | Not Available | Negative | 29064 - 29741 | 23644.4 |
| coa transferase subunit a | SAMIE_RS22610 | Not Available | Negative | 29738 - 30448 | 25764.8 |
| helix-turn-helix domain-containing protein | SAMIE_RS22615 | Not Available | Positive | 30601 - 31500 | 33791.6 |
| hydroxyquinol 1,2-dioxygenase | SAMIE_RS22620 | Not Available | Positive | 31759 - 32271 | 18555.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

