Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | SAMIE_RS22940 | Not Available | Negative | 27986 - 28606 | 22759.1 |
| tn3 family transposase | SAMIE_RS22945 | Not Available | Positive | 28803 - 31712 | 109016.0 |
| recombinase family protein | SAMIE_RS22950 | Not Available | Positive | 31855 - 32721 | 32170.6 |
| type ii toxin-antitoxin system rele/pare family toxin | SAMIE_RS22955 | Not Available | Negative | 32688 - 33023 | 12845.4 |
| type ii toxin-antitoxin system pard family antitoxin | SAMIE_RS22960 | Not Available | Negative | 33020 - 33292 | 10096.6 |
| hypothetical protein | SAMIE_RS22965 | Not Available | Negative | 33560 - 34918 | 49397.2 |
| recombinase family protein | SAMIE_RS22970 | Not Available | Negative | 34915 - 35520 | 22418.0 |
| tn3 family transposase | SAMIE_RS22975 | Not Available | Positive | 35668 - 38601 | 108483.0 |
| sprt-like domain-containing protein | SAMIE_RS22980 | Not Available | Positive | 38917 - 39549 | 22539.1 |
| replication protein a | SAMIE_RS23595 | Not Available | Positive | 1 - 714 | 26805.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

