Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS22890 | Not Available | Negative | 22634 - 22888 | 9568.95 |
| class i sam-dependent methyltransferase | SAMIE_RS22895 | Not Available | Negative | 23003 - 23737 | 27459.9 |
| hypothetical protein | SAMIE_RS22900 | Not Available | Negative | 23821 - 24057 | 7898.56 |
| hypothetical protein | SAMIE_RS22905 | Not Available | Negative | 24131 - 24448 | 12110.6 |
| hypothetical protein | SAMIE_RS22910 | Not Available | Positive | 24781 - 25098 | 11757.1 |
| flagellar hook-basal body complex protein flie | SAMIE_RS22915 | Not Available | Positive | 25202 - 25555 | 12237.6 |
| hypothetical protein | SAMIE_RS22920 | Not Available | Negative | 25581 - 25961 | 13399.0 |
| hypothetical protein | SAMIE_RS22925 | Not Available | Positive | 26330 - 26653 | 11429.8 |
| copg family transcriptional regulator | SAMIE_RS22930 | Not Available | Positive | 26650 - 27036 | 14842.3 |
| tyrosine-type recombinase/integrase | SAMIE_RS22935 | Not Available | Positive | 27033 - 27989 | 34996.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

