Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | SAMIE_RS22840 | Not Available | Negative | 12973 - 13425 | 16858.0 |
| dde-type integrase/transposase/recombinase | SAMIE_RS24195 | Not Available | Negative | 13845 - 14023 | 6691.92 |
| energy transducer tonb | SAMIE_RS22850 | Not Available | Negative | 14188 - 14919 | 26744.4 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | SAMIE_RS22855 | Not Available | Negative | 14924 - 15538 | 21956.2 |
| tonb-dependent receptor | SAMIE_RS22860 | Not Available | Negative | 15547 - 17745 | 79448.9 |
| cdp-alcohol phosphatidyltransferase family protein | SAMIE_RS22865 | Not Available | Negative | 18044 - 18733 | 25351.4 |
| vacj family lipoprotein | SAMIE_RS22870 | Not Available | Negative | 18772 - 19764 | 35204.5 |
| c-type cytochrome | SAMIE_RS22875 | Not Available | Positive | 20121 - 20723 | 21625.3 |
| phosphatase pap2 family protein | SAMIE_RS22880 | Not Available | Positive | 20984 - 22006 | 37792.3 |
| mgtc/sapb family protein | SAMIE_RS22885 | Not Available | Negative | 22094 - 22570 | 16715.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

