Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SAMIE_RS21345 | Not Available | Negative | 204591 - 205946 | 52346.4 |
| site-specific integrase | SAMIE_RS21350 | Not Available | Negative | 205943 - 207175 | 46498.3 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS21355 | Not Available | Negative | 207266 - 209464 | 79214.2 |
| toprim domain-containing protein | SAMIE_RS21360 | Not Available | Negative | 209540 - 210385 | 30948.5 |
| replication protein repa | SAMIE_RS21365 | Not Available | Negative | 210550 - 211854 | 48837.4 |
| hypothetical protein | SAMIE_RS23520 | Not Available | Positive | 211837 - 212061 | 7799.74 |
| aaa family atpase | SAMIE_RS22770 | Not Available | Positive | 1 - 642 | 22138.6 |
| hypothetical protein | SAMIE_RS22775 | Not Available | Positive | 660 - 938 | 9467.44 |
| sgcj/ecac family oxidoreductase | SAMIE_RS22780 | Not Available | Negative | 955 - 1377 | 15634.4 |
| replication initiation protein | SAMIE_RS22785 | Not Available | Negative | 1428 - 2303 | 33291.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

