Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | SAMIE_RS21300 | Not Available | Negative | 193070 - 194461 | 51843.0 |
| ardc family protein | SAMIE_RS21305 | Not Available | Negative | 194630 - 195364 | 27630.3 |
| parb/repb/spo0j family partition protein | SAMIE_RS21310 | Not Available | Negative | 195466 - 197571 | 76223.6 |
| strawberry notch c-terminal domain-containing protein | SAMIE_RS21315 | Not Available | Negative | 197677 - 199413 | 64280.9 |
| hypothetical protein | SAMIE_RS23870 | Not Available | Negative | 199651 - 199932 | 10031.1 |
| tyrosine-type recombinase/integrase | SAMIE_RS21320 | Not Available | Positive | 199903 - 201120 | 45314.6 |
| tyrosine-type recombinase/integrase | SAMIE_RS21325 | Not Available | Positive | 201117 - 202031 | 34771.8 |
| tyrosine-type recombinase/integrase | SAMIE_RS21330 | Not Available | Positive | 202028 - 203071 | 39075.7 |
| hypothetical protein | SAMIE_RS21335 | Not Available | Negative | 203068 - 203433 | 13225.7 |
| tyrosine-type recombinase/integrase | SAMIE_RS21340 | Not Available | Negative | 203590 - 204594 | 37535.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

