Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prtrc system parb family protein | SAMIE_RS21250 | Not Available | Negative | 183119 - 184708 | 56570.8 |
| hypothetical protein | SAMIE_RS21255 | Not Available | Negative | 184836 - 185849 | 37595.7 |
| hypothetical protein | SAMIE_RS21260 | Not Available | Positive | 185937 - 186425 | 18187.7 |
| thermonuclease family protein | SAMIE_RS21265 | Not Available | Negative | 186429 - 186929 | 17786.0 |
| hypothetical protein | SAMIE_RS21270 | Not Available | Negative | 186929 - 187171 | 9003.86 |
| duf6927 domain-containing protein | SAMIE_RS21275 | Not Available | Negative | 187172 - 187780 | 23039.7 |
| ardc family protein | SAMIE_RS21280 | Not Available | Negative | 187824 - 188060 | 8285.63 |
| ardc family protein | SAMIE_RS21285 | Not Available | Negative | 188117 - 189019 | 33052.7 |
| integrase | SAMIE_RS21290 | Not Available | Negative | 189064 - 191289 | 81070.3 |
| hypothetical protein | SAMIE_RS21295 | Not Available | Negative | 191286 - 193073 | 65566.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

