Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS21100 | Not Available | Negative | 158482 - 158799 | 11233.4 |
| hypothetical protein | SAMIE_RS21105 | Not Available | Negative | 158796 - 159299 | 17836.6 |
| hypothetical protein | SAMIE_RS21110 | Not Available | Negative | 159341 - 159847 | 17839.1 |
| antirestriction protein | SAMIE_RS21115 | Not Available | Negative | 159909 - 160343 | 15806.5 |
| duf736 domain-containing protein | SAMIE_RS21120 | Not Available | Negative | 160507 - 160965 | 16160.1 |
| hypothetical protein | SAMIE_RS24060 | Not Available | Positive | 161148 - 161510 | 12537.7 |
| dps family protein | SAMIE_RS21130 | Not Available | Positive | 161610 - 162101 | 18092.5 |
| catalase | SAMIE_RS21135 | Not Available | Positive | 162275 - 164482 | 80240.8 |
| ankyrin repeat domain-containing protein | SAMIE_RS21140 | Not Available | Positive | 164472 - 165044 | 19863.4 |
| hypothetical protein | SAMIE_RS21145 | Not Available | Negative | 165588 - 165782 | 6728.04 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

