Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS21050 | Not Available | Negative | 149892 - 150299 | 14706.6 |
| duf2493 domain-containing protein | SAMIE_RS21055 | Not Available | Negative | 150503 - 151477 | 35891.8 |
| hypothetical protein | SAMIE_RS21060 | Not Available | Positive | 152001 - 152234 | 8415.24 |
| nyn domain-containing protein | SAMIE_RS21065 | Not Available | Negative | 152256 - 153128 | 30605.2 |
| single-stranded dna-binding protein | SAMIE_RS21070 | Not Available | Negative | 153221 - 153547 | 11796.8 |
| hypothetical protein | SAMIE_RS21075 | Not Available | Negative | 154042 - 154971 | 31628.6 |
| slc13 family permease | SAMIE_RS21080 | Not Available | Positive | 155074 - 156381 | 45470.0 |
| duf736 domain-containing protein | SAMIE_RS21085 | Not Available | Negative | 156510 - 157034 | 18496.7 |
| hypothetical protein | SAMIE_RS21090 | Not Available | Negative | 157176 - 157871 | 24563.8 |
| hypothetical protein | SAMIE_RS21095 | Not Available | Positive | 157967 - 158485 | 18933.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

