Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS21000 | Not Available | Positive | 140016 - 140942 | 32427.1 |
| duf805 domain-containing protein | SAMIE_RS21005 | Not Available | Negative | 140939 - 141340 | 14015.4 |
| hypothetical protein | SAMIE_RS21010 | Not Available | Negative | 141354 - 141926 | 21285.6 |
| hypothetical protein | SAMIE_RS21015 | Not Available | Negative | 141932 - 142135 | 7523.42 |
| mobf family relaxase | SAMIE_RS21020 | Not Available | Negative | 142150 - 145182 | 107733.0 |
| type iv secretion system dna-binding domain-containing protein | SAMIE_RS21025 | Not Available | Negative | 145184 - 147475 | 84924.8 |
| hypothetical protein | SAMIE_RS21030 | Not Available | Negative | 147465 - 147755 | 10897.1 |
| hypothetical protein | SAMIE_RS21035 | Not Available | Positive | 148559 - 148777 | 8024.66 |
| hypothetical protein | SAMIE_RS21040 | Not Available | Negative | 148891 - 149115 | 8137.44 |
| hypothetical protein | SAMIE_RS21045 | Not Available | Negative | 149659 - 149895 | 8634.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

