Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| giy-yig nuclease family protein | SAMIE_RS20950 | Not Available | Negative | 127508 - 128344 | 30594.1 |
| site-specific integrase | SAMIE_RS20955 | Not Available | Negative | 128345 - 129346 | 35878.5 |
| 2-hydroxyacid dehydrogenase | SAMIE_RS20960 | Not Available | Negative | 129458 - 130477 | 36530.0 |
| eal domain-containing protein | SAMIE_RS20965 | Not Available | Positive | 130655 - 133096 | 87837.4 |
| cation:proton antiporter | SAMIE_RS20970 | Not Available | Positive | 133468 - 135177 | 59296.5 |
| ardc family protein | SAMIE_RS20975 | Not Available | Positive | 135300 - 135569 | 9937.18 |
| type ii toxin-antitoxin system hipa family toxin | SAMIE_RS20980 | Not Available | Negative | 135714 - 136976 | 46344.9 |
| helix-turn-helix domain-containing protein | SAMIE_RS20985 | Not Available | Negative | 136980 - 137324 | 12593.3 |
| hypothetical protein | SAMIE_RS20990 | Not Available | Negative | 137413 - 137958 | 20229.2 |
| sensor histidine kinase | SAMIE_RS20995 | Not Available | Negative | 138066 - 139529 | 52715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

