Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbc/virb2 family protein | SAMIE_RS20755 | Not Available | Negative | 92382 - 92702 | 10493.0 |
| hypothetical protein | SAMIE_RS20760 | Not Available | Positive | 93063 - 93575 | 18218.7 |
| hypothetical protein | SAMIE_RS20765 | Not Available | Positive | 93803 - 94219 | 15769.4 |
| lytic transglycosylase domain-containing protein | SAMIE_RS20770 | Not Available | Negative | 94274 - 95269 | 34622.3 |
| hypothetical protein | SAMIE_RS20775 | Not Available | Positive | 95380 - 96675 | 47358.0 |
| hypothetical protein | SAMIE_RS20780 | Not Available | Negative | 96724 - 96993 | 10084.5 |
| hypothetical protein | SAMIE_RS20785 | Not Available | Positive | 97214 - 97498 | 9939.55 |
| duf983 domain-containing protein | SAMIE_RS20790 | Not Available | Positive | 97636 - 98139 | 18252.5 |
| sensor histidine kinase | SAMIE_RS20795 | Not Available | Negative | 98155 - 98706 | 19952.0 |
| ardc family protein | SAMIE_RS20800 | Not Available | Negative | 98721 - 98975 | 9686.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

