Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS20655 | Not Available | Positive | 72840 - 73049 | 7628.03 |
| conjugal transfer protein trag n-terminal domain-containing protein | SAMIE_RS20660 | Not Available | Negative | 73058 - 75868 | 99529.3 |
| conjugal transfer protein trah | SAMIE_RS20665 | Not Available | Negative | 75885 - 77348 | 51922.9 |
| conjugal transfer protein traf | SAMIE_RS20670 | Not Available | Negative | 77348 - 78163 | 30414.2 |
| hypothetical protein | SAMIE_RS20675 | Not Available | Negative | 78379 - 78771 | 14036.1 |
| conjugal transfer protein tran | SAMIE_RS20680 | Not Available | Negative | 78752 - 80614 | 66533.4 |
| type-f conjugative transfer system pilin assembly protein trbc | SAMIE_RS20685 | Not Available | Negative | 80614 - 81357 | 26245.1 |
| conjugal transfer pilus assembly protein trau | SAMIE_RS20690 | Not Available | Negative | 81368 - 82390 | 36856.0 |
| hypothetical protein | SAMIE_RS20695 | Not Available | Negative | 82387 - 82659 | 9974.44 |
| type-f conjugative transfer system protein traw | SAMIE_RS20700 | Not Available | Negative | 82659 - 83312 | 23708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

