Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ardc family protein | SAMIE_RS20605 | Not Available | Negative | 66587 - 66754 | 6073.95 |
| alkylphosphonate utilization protein | SAMIE_RS20610 | Not Available | Negative | 66786 - 67094 | 11100.1 |
| helix-turn-helix domain-containing protein | SAMIE_RS20615 | Not Available | Negative | 67109 - 67432 | 11254.6 |
| phosphoenolpyruvate carboxykinase | SAMIE_RS20620 | Not Available | Positive | 67530 - 69137 | 58128.0 |
| acyl-coa thioesterase | SAMIE_RS20625 | Not Available | Positive | 69196 - 69615 | 15595.7 |
| hd-gyp domain-containing protein | SAMIE_RS20630 | Not Available | Positive | 69678 - 70385 | 25669.8 |
| acyl carrier protein | SAMIE_RS20635 | Not Available | Positive | 70603 - 70839 | 8568.1 |
| hded family acid-resistance protein | SAMIE_RS20640 | Not Available | Negative | 70913 - 71536 | 21659.4 |
| bax inhibitor-1 family protein | SAMIE_RS20645 | Not Available | Negative | 71550 - 72251 | 25180.3 |
| hypothetical protein | SAMIE_RS20650 | Not Available | Negative | 72448 - 72765 | 11412.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

