Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is21-like element helper atpase istb | SAMIE_RS21475 | Not Available | Positive | 18210 - 18980 | 28135.1 |
| is21-like element helper atpase istb | SAMIE_RS21480 | Not Available | Negative | 19059 - 19898 | 31473.0 |
| is21 family transposase | SAMIE_RS21485 | Not Available | Negative | 19895 - 21367 | 55523.8 |
| hypothetical protein | SAMIE_RS21490 | Not Available | Positive | 21628 - 22431 | 29465.5 |
| integrase | SAMIE_RS21495 | Not Available | Positive | 22436 - 24238 | 67876.2 |
| hypothetical protein | SAMIE_RS21500 | Not Available | Positive | 24222 - 24686 | 16735.8 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS21505 | Not Available | Positive | 24790 - 25392 | 22760.3 |
| duf3768 domain-containing protein | SAMIE_RS21510 | Not Available | Positive | 25389 - 25739 | 12821.2 |
| hypothetical protein | SAMIE_RS21515 | Not Available | Positive | 25785 - 25979 | 6927.31 |
| hypothetical protein | SAMIE_RS21520 | Not Available | Positive | 25976 - 26305 | 12072.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

