Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain-containing protein | SAMIE_RS24175 | Not Available | Negative | 60307 - 60576 | 9726.54 |
| ardc family protein | SAMIE_RS20565 | Not Available | Negative | 60587 - 61381 | 28833.1 |
| nad(p)/fad-dependent oxidoreductase | SAMIE_RS20570 | Not Available | Positive | 61605 - 62555 | 33276.6 |
| hypothetical protein | SAMIE_RS20575 | Not Available | Negative | 62589 - 62852 | 9276.97 |
| hypothetical protein | SAMIE_RS20580 | Not Available | Positive | 62956 - 63144 | 6834.78 |
| hypothetical protein | SAMIE_RS24010 | Not Available | Negative | 63223 - 63357 | 4672.71 |
| pilz domain-containing protein | SAMIE_RS20585 | Not Available | Negative | 63354 - 63686 | 11899.3 |
| transglutaminase-like domain-containing protein | SAMIE_RS20590 | Not Available | Negative | 63778 - 64557 | 28259.4 |
| abc1 kinase family protein | SAMIE_RS20595 | Not Available | Positive | 64713 - 66218 | 54391.7 |
| response regulator | SAMIE_RS23860 | Not Available | Negative | 66258 - 66497 | 8579.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

