Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i mannose-6-phosphate isomerase | SAMIE_RS20515 | Not Available | Negative | 52973 - 53809 | 30035.8 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | SAMIE_RS20520 | Not Available | Negative | 53844 - 54920 | 37682.2 |
| chaperonin groel | SAMIE_RS20525 | Not Available | Negative | 55057 - 56676 | 57369.0 |
| co-chaperone groes | SAMIE_RS20530 | Not Available | Negative | 56730 - 57044 | 11420.7 |
| hypothetical protein | SAMIE_RS20535 | Not Available | Positive | 57316 - 57552 | 8676.31 |
| usg protein | SAMIE_RS20540 | Not Available | Positive | 57549 - 57818 | 10404.4 |
| hypothetical protein | SAMIE_RS20545 | Not Available | Positive | 57815 - 58213 | 14704.0 |
| hypothetical protein | SAMIE_RS20550 | Not Available | Positive | 58258 - 58488 | 8979.47 |
| duf1971 domain-containing protein | SAMIE_RS20555 | Not Available | Positive | 58614 - 58886 | 10142.2 |
| atp-binding protein | SAMIE_RS20560 | Not Available | Negative | 58941 - 60218 | 45328.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

