Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMIE_RS20460 | Not Available | Positive | 36219 - 36500 | 9685.57 |
| replication initiation protein | SAMIE_RS20465 | Not Available | Negative | 36557 - 37468 | 34590.2 |
| ardc family protein | SAMIE_RS20470 | Not Available | Negative | 37776 - 39887 | 77971.1 |
| tn3 family transposase | SAMIE_RS20475 | Not Available | Positive | 40010 - 42919 | 109016.0 |
| recombinase family protein | SAMIE_RS20480 | Not Available | Positive | 43062 - 43928 | 32170.6 |
| hypothetical protein | SAMIE_RS23855 | Not Available | Negative | 43953 - 44360 | 14878.7 |
| response regulator | SAMIE_RS20495 | Not Available | Negative | 44427 - 47570 | 114888.0 |
| phosphomannomutase | SAMIE_RS20500 | Not Available | Negative | 47793 - 49349 | 54325.6 |
| glycoside hydrolase family 130 protein | SAMIE_RS20505 | Not Available | Negative | 49330 - 50679 | 49759.5 |
| glycosyltransferase family 4 protein | SAMIE_RS20510 | Not Available | Negative | 50670 - 52976 | 84119.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

