Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Integrase | SAMIE_RS20430 | Not Available | Positive | 32122 - 33102 | 35834.4 |
| Attr | Not Available | Not Available | Positive | 34492 - 34504 | Not Available |
| aaa family atpase | SAMIE_RS20265 | Not Available | Positive | 1 - 1203 | 44497.5 |
| parb/repb/spo0j family partition protein | SAMIE_RS20270 | Not Available | Positive | 1463 - 2446 | 37253.0 |
| hypothetical protein | SAMIE_RS20275 | Not Available | Negative | 2493 - 3296 | 28754.9 |
| histidine phosphatase family protein | SAMIE_RS20435 | Not Available | Negative | 33099 - 33719 | 22875.0 |
| type ii toxin-antitoxin system rele/pare family toxin | SAMIE_RS20440 | Not Available | Negative | 33738 - 34031 | 10879.1 |
| copg family ribbon-helix-helix protein | SAMIE_RS20445 | Not Available | Negative | 34019 - 34297 | 10606.4 |
| transcription elongation protein sprt | SAMIE_RS20450 | Not Available | Positive | 34837 - 35478 | 22721.1 |
| aaa family atpase | SAMIE_RS20455 | Not Available | Positive | 35558 - 36193 | 21819.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

