Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | SAMIE_RS20375 | Not Available | Positive | 22244 - 23677 | 51479.9 |
| duf3240 family protein | SAMIE_RS20380 | Not Available | Positive | 23670 - 23969 | 10895.3 |
| tolc family protein | SAMIE_RS20385 | Not Available | Positive | 23966 - 24940 | 34787.4 |
| is1380-like element issp1 family transposase | SAMIE_RS20395 | Not Available | Negative | 24979 - 26328 | 49421.6 |
| amp-binding protein | SAMIE_RS20400 | Not Available | Negative | 26429 - 27001 | 20972.0 |
| Zinc-containing alcohol dehydrogenase superfamily protein | SAMIE_RS20405 | Not Available | Positive | 27223 - 28704 | 51713.1 |
| fad-dependent monooxygenase | SAMIE_RS20410 | Not Available | Positive | 29180 - 30775 | 59550.3 |
| tetr family transcriptional regulator c-terminal domain-containing protein | SAMIE_RS20415 | Not Available | Negative | 31123 - 31473 | 13091.6 |
| tetr/acrr family transcriptional regulator | SAMIE_RS20420 | Not Available | Negative | 31451 - 31699 | 9532.35 |
| copg family transcriptional regulator | SAMIE_RS20425 | Not Available | Positive | 31748 - 32116 | 14120.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

