Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Transposase | SAMIE_RS20330 | Not Available | Negative | 13641 - 15134 | 55747.6 |
| Transposase | SAMIE_RS20335 | Not Available | Negative | 15429 - 15800 | 13803.7 |
| Isrso10-transposase orfa protein | SAMIE_RS20340 | Not Available | Negative | 15797 - 16210 | 14881.0 |
| hypothetical protein | SAMIE_RS23505 | Not Available | Positive | 16305 - 16544 | 8320.27 |
| Transposase | SAMIE_RS23510 | Not Available | Positive | 16541 - 16912 | 13803.7 |
| Transposase | SAMIE_RS20350 | Not Available | Positive | 17207 - 18700 | 55747.6 |
| helix-turn-helix domain-containing protein | SAMIE_RS20355 | Not Available | Positive | 18739 - 19053 | 11663.0 |
| tonb-dependent receptor domain-containing protein | SAMIE_RS20360 | Not Available | Negative | 19113 - 19748 | 23459.7 |
| Is21 transposase | SAMIE_RS20365 | Not Available | Positive | 19872 - 21395 | 58272.1 |
| Transposase/is protein | SAMIE_RS20370 | Not Available | Positive | 21385 - 22167 | 28617.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

