Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylase | SAMIE_RS22435 | Not Available | Positive | 205340 - 205741 | 14459.0 |
| hypothetical protein | SAMIE_RS23925 | Not Available | Negative | 205849 - 206130 | 10031.1 |
| tyrosine-type recombinase/integrase | SAMIE_RS22440 | Not Available | Positive | 206101 - 207318 | 45314.6 |
| tyrosine-type recombinase/integrase | SAMIE_RS22445 | Not Available | Positive | 207315 - 208229 | 34771.8 |
| tyrosine-type recombinase/integrase | SAMIE_RS22450 | Not Available | Positive | 208226 - 209269 | 39075.7 |
| strawberry notch c-terminal domain-containing protein | SAMIE_RS22455 | Not Available | Positive | 209396 - 211141 | 63887.7 |
| hypothetical protein | SAMIE_RS22460 | Not Available | Negative | 211116 - 211325 | 6986.7 |
| hypothetical protein | SAMIE_RS22465 | Not Available | Negative | 211436 - 211642 | 7257.66 |
| Transposase, putative | SAMIE_RS20280 | Not Available | Positive | 3495 - 5168 | 61977.3 |
| tnib family ntp-binding protein | SAMIE_RS20285 | Not Available | Positive | 5165 - 6001 | 30895.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

