Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | SAMIE_RS23910 | Not Available | Positive | 193155 - 193880 | 25876.9 |
| mucr family transcriptional regulator | SAMIE_RS22395 | Not Available | Negative | 193919 - 194398 | 16999.7 |
| duf4238 domain-containing protein | SAMIE_RS22400 | Not Available | Positive | 194731 - 195639 | 34159.9 |
| virulence factor | SAMIE_RS22405 | Not Available | Negative | 195863 - 196543 | 23574.4 |
| phosphatidylglycerol lysyltransferase domain-containing protein | SAMIE_RS23915 | Not Available | Negative | 196594 - 197256 | 24832.9 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS23920 | Not Available | Negative | 197202 - 197528 | 12046.5 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS24190 | Not Available | Positive | 200062 - 201441 | 49768.7 |
| tyrosine-type recombinase/integrase | SAMIE_RS22420 | Not Available | Negative | 201588 - 202592 | 37535.1 |
| tyrosine-type recombinase/integrase | SAMIE_RS22425 | Not Available | Negative | 202589 - 203944 | 52346.4 |
| site-specific integrase | SAMIE_RS22430 | Not Available | Negative | 203941 - 205173 | 46498.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

