Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| para family protein | SAMIE_RS22340 | Not Available | Positive | 182425 - 183159 | 26668.8 |
| hypothetical protein | SAMIE_RS22345 | Not Available | Positive | 183152 - 183547 | 13961.8 |
| replication initiation protein | SAMIE_RS22350 | Not Available | Negative | 183586 - 184701 | 41765.2 |
| amidohydrolase family protein | SAMIE_RS22355 | Not Available | Positive | 185673 - 186716 | 38362.0 |
| hypothetical protein | SAMIE_RS22360 | Not Available | Positive | 186848 - 187417 | 19769.2 |
| do family serine endopeptidase | SAMIE_RS22365 | Not Available | Positive | 187597 - 189102 | 52402.3 |
| yoak family protein | SAMIE_RS22375 | Not Available | Positive | 189573 - 190238 | 22941.5 |
| fused mfs/spermidine synthase | SAMIE_RS22380 | Not Available | Positive | 190235 - 191134 | 32787.5 |
| toprim domain-containing protein | SAMIE_RS22385 | Not Available | Positive | 191218 - 192069 | 31165.7 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS23905 | Not Available | Positive | 192210 - 193031 | 30091.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

