Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thermonuclease family protein | SAMIE_RS21425 | Not Available | Positive | 10984 - 11499 | 18643.4 |
| hypothetical protein | SAMIE_RS21430 | Not Available | Positive | 11616 - 12644 | 37785.4 |
| hypothetical protein | SAMIE_RS21435 | Not Available | Negative | 12690 - 13178 | 18286.8 |
| hypothetical protein | SAMIE_RS21440 | Not Available | Negative | 13251 - 13946 | 25056.2 |
| hypothetical protein | SAMIE_RS21445 | Not Available | Positive | 14141 - 14785 | 23814.7 |
| hypothetical protein | SAMIE_RS21450 | Not Available | Negative | 14789 - 14968 | 6522.9 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS21455 | Not Available | Positive | 15073 - 15441 | 13470.3 |
| tir domain-containing protein | SAMIE_RS21460 | Not Available | Positive | 15681 - 16178 | 18149.6 |
| toll/interleukin-1 receptor domain-containing protein | SAMIE_RS21465 | Not Available | Positive | 16228 - 16587 | 13224.8 |
| is21 family transposase | SAMIE_RS21470 | Not Available | Positive | 16694 - 18220 | 57698.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

