Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alcohol dehydrogenase adhp | SAMIE_RS22290 | Not Available | Negative | 170127 - 171152 | 35552.8 |
| aldehyde dehydrogenase family protein | SAMIE_RS22295 | Not Available | Negative | 171179 - 172699 | 54829.4 |
| is21-like element helper atpase istb | SAMIE_RS22300 | Not Available | Negative | 172810 - 173580 | 28135.1 |
| is21 family transposase | SAMIE_RS22305 | Not Available | Negative | 173570 - 175096 | 57698.5 |
| hypothetical protein | SAMIE_RS22310 | Not Available | Negative | 175203 - 175766 | 20080.5 |
| marr family transcriptional regulator | SAMIE_RS22315 | Not Available | Positive | 175963 - 177093 | 39818.5 |
| tniq family protein | SAMIE_RS22320 | Not Available | Negative | 177348 - 178610 | 46411.5 |
| tnib family ntp-binding protein | SAMIE_RS22325 | Not Available | Negative | 178607 - 179443 | 30895.0 |
| mu transposase c-terminal domain-containing protein | SAMIE_RS22330 | Not Available | Negative | 179440 - 181113 | 61977.3 |
| hypothetical protein | SAMIE_RS22335 | Not Available | Positive | 181330 - 182040 | 25992.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

