Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium amiense |
| Strain | strain DSM 16289 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium amiense strain DSM 16289 plasmid pSAMIE_3, complete
Gene Summary
Adenine Count
38812 bp
Thymine Count
37780 bp
Guanine Count
66797 bp
Cytosine Count
68732 bp
Genome Length
212121 bp
Protein-coding Genes
218 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS24185 | Not Available | Negative | 159590 - 160120 | 20027.9 |
| type ii toxin-antitoxin system yafq family toxin | SAMIE_RS22245 | Not Available | Negative | 160636 - 160917 | 10994.1 |
| type ii toxin-antitoxin system relb/dinj family antitoxin | SAMIE_RS22250 | Not Available | Negative | 160904 - 161167 | 9285.29 |
| duf411 domain-containing protein | SAMIE_RS22255 | Not Available | Negative | 161551 - 161988 | 15387.1 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS22260 | Not Available | Negative | 162068 - 162604 | 18212.9 |
| tn3 family transposase | SAMIE_RS22265 | Not Available | Positive | 162726 - 165635 | 108715.0 |
| recombinase family protein | SAMIE_RS22270 | Not Available | Positive | 165778 - 166644 | 32214.6 |
| strawberry notch-like ntp hydrolase domain-containing protein | SAMIE_RS22275 | Not Available | Negative | 166708 - 167418 | 24239.1 |
| copper resistance protein b | SAMIE_RS22280 | Not Available | Negative | 167412 - 168398 | 35797.2 |
| copper resistance system multicopper oxidase | SAMIE_RS22285 | Not Available | Negative | 168395 - 170101 | 62191.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

